Biao Zhang Ph.D
Correspondence College of Information Engineering, Zhejiang University of Technology, Hangzhou, China, 310023
Email zh_bio@sjtu.edu.cn
Mobile 18317054032
Data of Brith 1989/10/07
Brief Biography 

Mr. Zhang Biao graduated from Changchun University of Science and Technology with a bachelor's degree in 2012. In 2015, he received a master's degree and graduated from Shanghai Jiaotong University. From 2015 to 2020, he studied for a PhD in the School of Electrical Engineering at Shanghai Jiao Tong University. led by professor Hong-Bing shen. Visiting scholar at the University of Michigan (Ann Arbor) in the United States from 2017 to 2019, and now a general faculty member of the School of Information Engineering, Zhejiang University of Technology

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Published Papers (>> Google Scholar Citation Profile)


Journal Papers
  • Biao Zhang, Xi Zhang, Robin Pearce, Hongbin Shen*,Yang Zhang*. A new protocol for atomic-level protein structure modeling and refinement using low-to-medium resolution cryo-EM density maps. [J]. Journal of Molecular Biology,2020.

  • Biao Zhang,, Wenyi Zhang, Yang Zhang, Hong-Bin Shen.. Fitting predicted protein atomic structures into a density map using multiobjective optimization of global and local energies. [J]. The Journal of Physical Chemistry, , 2020.

  • Shuo Yin Biao Zhang, Yang Yang, Yan Huang and Hong-Bin Shen*. Clustering enhancement of noisy cryo-electron microscopy single-particle images with a network structural similarity metric. [J]. Journal of Chemical Information and Modeling, 2019, 59: 1658-1667.

  • Sang Ho Park, Alex Ayoub, Young-Tae Lee, Jing Xu, Hanseong Kim, Wei ZhengBiao Zhang, Liang Sha, Sojin An, Yang Zhang*. GPCR-drug Interactions Prediction Michael A Cianfrocco*, Min Su*, Yali Dou*, Uhn-Soo Cho*. Cryo-EM structure of the human MLL1 core complex bound to the nucleosome. [J]. Nature Communications, 10: 5540 (2019).

  • Yu-Jiao Yang, Shuai Wang, Biao Zhang, Hong-Bin Shen*. Resolution measurement from a single reconstructed cryo-EM density map with multi-scale spectral analysis.. Journal of Chemical Information and Modeling, 58.6 (2018): 1303-1311.

  • Jing Yang, Qi-Yu Jin, Biao Zhang,and Hong-Bin Shen*, R2C: Improving ab initio residue contact map prediction using dynamic fusion strategy and Gaussian noise filter.. Journal of Membrane Biology, 2015, 248(6): 1005-1014.


Research interest
  • Bioinformatics: Predicted structure refinement, Rigid-body fitting based on cryo-EM density map, Multi-objective optimization. Data Mining: big data mining and optimization algorithms using high-performance computing. Denoise algorithm, image cluster algorithm.


AWARDS and HONORS

  • Dec. 2014 State of postgraduate scholarships
  • Jun. 2014 Advanced individual of graduate academic activities
  • Dec. 2013 State of postgraduate scholarships
  • Oct. 2013 Master's research award of Changchun University of Science and Technology
  • Oct. 2013 Title of outstanding graduate student of Changchun University of Science and Technology
  • Aug. 2012 The competition "outstanding volunteer" of Fifth session of the Chinese college students' computer design
  • Denoise algorithm, image cluster algorithm.

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